IITG

Organelle Biology And Cellular Ageing Lab
IITG

PUBLICATIONS



      RESEARCH ARTICLES
    1. Banerjee R, Mukherjee A, Adhikary A, Sharma S, Hussain MS, Ali ME, Nagotu S (2023) Insights into the role of the conserved GTPase domain residues T62 and S277 in yeast Dnm1. International Journal of Biological Macromolecules. doi: https://doi.org/10.1016/j.ijbiomac.2023.127381. Publisher - Elsevier; IF – 8.2 This manuscript was highlighted in the annual newsletter of Indian Society of Cell Biology (2023).

    2. Joshi N, Sarhadi TR, Raveendran A, Nagotu S (2023) Sporadic SNCA mutations A18T and A29S exhibit variable effects on protein aggregation, cell viability and oxidative stress. Molecular Biology Reports. doi: 10.1007/s11033-023-08457-7. Publisher - Springer; IF – 2.8

    3. Deori NM, Infant T, Thummer RP, Nagotu S (2022) Characterization of the multiple domains of Pex30 involved in subcellular localization of the protein and regulation of peroxisome number. Cell Biochemistry and Biophysics. doi: 10.1007/s12013-022-01122-z.Publisher - Springer; IF – 2.6

    4. Deb R, Nagotu S (2022) The nexus between peroxisome abundance and chronological ageing in Saccharomyces cerevisiae. Biogerontology. doi: 10.1007/s10522-022-09992-9 Publisher - Springer; IF – 4.5

    5. Deb R, Ghose S, Nagotu S (2022) Increased peroxisome proliferation is associated with early yeast replicative ageing. Current Genetics. doi: 10.1007/s00294-022-01233- Publisher - Springer; IF – 2.5

    6. Deori NM, Infant T, Sundaravadivelu PK, Thummer RP, Nagotu S (2022) Pex30 undergoes phosphorylation and regulates peroxisome number in Saccharomyces cerevisiae. Molecular Genetics and Genomics. doi: 10.1007/s00438-022-01872-8. Publisher - Springer; IF – 3.1

    7. Banerjee R, Kumar A, Satpati P and Nagotu S (2021) Mimicking human Drp1 disease-causing mutations in yeast Dnm1 reveals altered mitochondrial dynamics. Mitochondrion https://doi.org/10.1016/j.mito.2021.06.009 Publisher - Elsevier; IF – 4.4

    8. Glingston S, Rajpoot J, Deori NM, Deb R, Kumar S and Nagotu S (2021) Characterization of nucleocapsid and matrix proteins of Newcastle disease virus in yeast. 3 Biotech 11, 65. https://doi.org/10.1007/s13205-020-02624- Publisher - Springer; IF – 2.8

    9. Banerjee R, Deb R, Roy K, Chatterjee S, Nagotu S (2019) Uptake and intracellular fate of nona-arginine peptide in yeast. Peptide Science: doi.org/10.1002/pep2.24101 Publisher - Wiley; IF – 2.6

    10. Cepinska M, Veenhuis M, van der Klei IJ, Nagotu S (2011) Peroxisome fission is associated with reorganization of specific membrane proteins. Traffic.12: 925-37. Publisher - Wiley; IF – 4.5

    11. Nagotu S, Krikken AM, Otzen M, Kiel JA, Veenhuis M, van der Klei IJ (2008) Peroxisome fission in Hansenula polymorpha requires Mdv1 and Fis1, two proteins also involved in mitochondrial fission. Traffic. 9: 1471–1484. Publisher - Wiley; IF – 4.5

    12. Nagotu S, Saraya R, Otzen M, Veenhuis M, van der Klei IJ (2008) Peroxisome proliferation in Hansenula polymorpha requires Dnm1p which mediates fission but not de novo formation. Biochim Biophys Acta – Molecular Cell Research. 1783: 760–769. Publisher - Elsevier; IF – 5.1

    13. Otzen M, Krikken AM, Ozimek PZ, Kurbatova E, Nagotu S, Veenhuis M, van der Klei IJ (2006) In the yeast Hansenula polymorpha, peroxisome formation from the ER is independent of Pex19p, but involves the function of p24 proteins. FEMS Yeast Res. 6: 1157–1166. Publisher – Oxford academic; IF – 3.2

    14. Kuravi K, Nagotu S, Krikken AM, Sjollema K, Deckers M, Erdmann R, Veenhuis M, van der Klei IJ (2006) Dynamin-related proteins Vps1p and Dnm1p control peroxisome abundance in Saccharomyces cerevisiae. Journal of Cell Science. 119: 3994–4001. Publisher – Company of biologists; IF – 4.0

      15. COLLABORATIVE ARTICLES
    15. Radke J, Nagotu S, Girzalsky W, Chakraborty A, Deckers M., Schuldiner M, ... & Erdmann R (2021) Identification of Pex34p as a component of the peroxisomal de novo biogenesis machinery in yeast. bioRxiv.

    16. Narayan G, Agrawal A, Sen P, Nagotu S, Thummer RP (2023) Production of Bioactive Human PAX4 protein from E. coli. The Protein Journal. doi: 10.1007/s10930-023-10143-3. Publisher – Springer; IF – 3.0

    17. Narayan G, Agrawal A, Joshi N, Gogoi R, Nagotu S, Thummer RP (2021) Protein Production and Purification of a Codon-Optimized Human NGN3 Transcription Factor from E. coli. The Protein Journal. doi: 10.1007/s10930-021-10020-x. Publisher – Springer; IF – 3.0

    18. Pathak S, Gupta R, Parkar H, Joshi N, Nagotu S, Kale A (2021) The role of Colchicine on actin polymerization dynamics: as a potent anti-angiogenic factor Journal of Biomolecular Structure & Dynamics. Publisher – Taylor and Francis Ltd.; IF – 4.4

    19. Narayan G, Sundaravadivelu PK, Agrawal A, Gogoi R, Nagotu S & Thummer RP (2021) Soluble expression, purification, and secondary structure determination of human PDX1 transcription factor. Protein Expression and Purification, 105807. Publisher – ScienceDirect; IF – 1.6

    20. Pathak S, Tripathi S, Deori N, Ahmad B, Verma H, Lokhande R, Nagotu S, Kale A (2021) Effect of Tetracycline family of antibiotics on actin aggregation, resulting in the formation of Hirano bodies responsible for neuropathological disorders. Journal of Biomolecular Structure & Dynamics. doi:: 10.1080/07391102.2020.1717629. Publisher – Taylor and Francis Ltd.; IF – 4.4

    21. Pathak S, Deori N, Sharma A, Nagotu S & Kale A (2020) In vitro, in vivo and in silico rationale for the muscle loss due to therapeutic drugs used in the treatment of Mycobacterium tuberculosis infection. Journal of Biomolecular Structure and Dynamics, 1-17. Publisher – Taylor and Francis Ltd.; IF – 4.4

    22. Maurya PK, Kumar P, Nagotu S, Chand S, Chandra P (2016) Multi-target detection of oxidative stress biomarkers in quercetin and myricetin treated human red blood cells. Royal Society Of Chemistry Advances 6 (58): 53195-53202. Publisher – Royal Society Of Chemistry Publishing; IF – 3.9

      23. REVIEW ARTICLES/ BOOK CHAPTERS
    23. Adhikary A, Mukherjee A, Banerjee R, Nagotu S (2023) DRP1: At the crossroads of dysregulated mitochondrial dynamics and altered cell signaling in cancer cells. American Chemical Society Omega. doi: https://doi.org/10.1021/acsomega.3c06547. Publisher – American Chemical Society Publications; IF – 4.1

    24. Sarhadi TR, Panse JS, Nagotu S (2023) Mind the gap: Methods to study membrane contact sites. Experimental Cell Research. doi: https://doi.org/10.1016/ j.yexcr.2023.113756. Publisher – ScienceDirect; IF – 3.7

    25. Kashyap I, Deb R, Battineni A, Nagotu S (2023) Acyl CoA oxidase: from its expression, structure, folding, and import to its role in human health and disease. Molecular Genetics and Genomics. doi: 10.1007/s00438-023-02059-5. Publisher – Springer; IF – 3.1

    26. Deori NM, Nagotu S (2022) Peroxisome biogenesis and inter-organelle communication: an indispensable role for Pex11 and Pex30 family proteins in yeast. Current Genetics. doi: 10.1007/s00294-022-01254. Publisher – Springer; IF – 2.4

    27. Banerjee R, Mukherjee A, Nagotu S (2022) Mitochondrial dynamics and its impact on human health and diseases: inside the DRP1 blackbox. Journal of Molecular Medicine. doi: 10.1007/s00109-021-02150-7. Publisher – Springer; IF – 4.096

    28. Infant T, Deb R, Ghose S, Nagotu S (2021) Post-translational modifications of proteins associated with yeast peroxisome membrane: An essential mode of regulatory mechanism. Genes to Cells. doi: 10.1111/gtc.12892. Publisher – Wiley; IF – 2.1

    29. Glingston S, Yadav J, Rajpoot J, Joshi N and Nagotu S (2021) "Contribution of yeast models to virus research", Applied Microbiology and Biotechnology. doi: https://doi.org/10.1007/s00253-021-11331-w. Publisher – Springer; IF – 5.2

    30. Deb R, Joshi N, Nagotu S (2021) Peroxisomes of the Brain: Distribution, functions and associated diseases. Neurotoxicity Research. doi:10.1007/s12640-020-00323-9. Publisher – Springer; IF – 3.7

    31. Joshi N, Atchaya SR, Nagotu S (2020) Chaperones and Proteostasis: Role in Parkinson's Disease. Diseases:8(2):E24. doi: 10.3390/diseases8020024. Publisher – MDPI; IF – 3.7

    32. Banerjee R, Joshi N, Nagotu S (2020) Cell organelles and yeast longevity: an intertwined regulation. Current Genetics. doi: 10.1007/s00294-019-01035-0. Publisher – Springer; IF – 2.5

    33. Glingston RS, Deb R, Kumar S, Nagotu S (2018) Organelle dynamics and viral infections: at cross roads. Microbes and Infection; doi:10.1016/j.micinf.2018.06.002. Publisher – ScienceDirect; IF – 5.8

    34. Deori NM, Kale A, Maurya PK, Nagotu S (2018) Peroxisomes: role in cellular ageing and age related disorders. Biogerontology. doi: 10.1007/s10522-018-9761-9. Publisher – Springer; IF – 4.5

    35. Deb R, Nagotu S (2017) Versatility of peroxisomes: An evolving concept. Tissue and Cell. doi: http://dx.doi.org/10.1016/j.tice.2017.03.002. Publisher – ScienceDirect; IF – 2.6

    36. Deori NM, Deb R, Banerjee R, Nagotu S (2018) Yeast: A Multifaceted Eukaryotic Microbe and Its Biotechnological Applications. In book: Advances in Microbial Biotechnology Current Trends and Future Prospects. Publisher: APPLE ACADEMIC PRESS

    37. Nagotu S, Kalel VC, Platta H, Erdmann R (2012) Molecular basis of peroxisomal biogenesis disorders caused by defects in peroxisomal matrix protein import. Biochim Biophys Acta – Molecular Basis of Disease. doi: 1822: 1326–1336. Publisher – ScienceDirect; IF – 6.2

    38. Nagotu S, Veenhuis M, van der Klei IJ (2010) Divide et impera: the dictum of peroxisomes. Traffic. doi:11:175-84. Publisher – Wiley; IF – 4.5